Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs9348716 | chr6:26375658 | G/A | 3.08E-7 | 213 | 16.47 | 13.6 | 9.77 | KM Plot |
| KIRP | rs935204 | chr15:58457632 | C/T | 1.78E-5 | 214 | 16.43 | 18 | 11.7 | KM Plot |
| KIRP | rs9353498 | chr6:88482445 | A/G | 1.93E-6 | 208 | 8.2 | 10.03 | 18.25 | KM Plot |
| KIRP | rs9357006 | chr6:26364628 | A/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9357029 | chr6:26970402 | A/G | 2.66E-6 | 214 | 4.58 | 11.63 | 16.97 | KM Plot |
| KIRP | rs9358930 | chr6:26357011 | C/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9358932 | chr6:26362705 | A/G | 3.08E-7 | 214 | 9.77 | 13.17 | 16.5 | KM Plot |
| KIRP | rs9358934 | chr6:26363755 | G/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9358935 | chr6:26369587 | A/G | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9358936 | chr6:26370657 | A/G | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9358937 | chr6:26374274 | C/G | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs9358938 | chr6:26387546 | C/T | 2.69E-8 | 208 | 16.45 | 13.17 | 9.77 | KM Plot |
| KIRP | rs936312 | chr19:16546127 | C/T | 2.62E-11 | 214 | 8.08 | 13.1 | 16.5 | KM Plot |
| KIRP | rs936313 | chr19:16546384 | A/G | 2.62E-11 | 214 | 16.5 | 13.1 | 8.08 | KM Plot |
| KIRP | rs9366653 | chr6:26354247 | G/A | 3.08E-7 | 213 | 16.5 | 13.38 | 9.77 | KM Plot |